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Based on the latest cosmological observational and theoretical advancements, this paper proposes a unified systems theory framework, conceptualizing the universe as an adaptive ecosystem with a fundamental architecture of "spacetime-dark matter-dark energy". Through the metaphor of a "computer operating system", it elaborates on the roles of spacetime as a structural entity, dark matter as a gravitational framework, and dark energy as a functional core. It also explores the implications of this framework for understanding physical laws, cosmic evolution, and the nature of information, attempting to establish a unified theory for comprehending the universe. It is important to emphasize that all physical theories are essentially sets of "models" or "metaphorical systems" used to explain and predict observational phenomena. The "operating system" paradigm presented herein is also an approximate description of the complex cosmic reality, not the ultimate answer.